Package 'ggstatsplot'

A list containing ggplot objects.

A list of additional arguments passed to patchwork::wrap_plots(), except for guides argument which is already separately specified here.

A list of additional arguments passed to patchwork::plot_annotation().

A string specifying how guides should be treated in the layout. 'collect' will collect guides below to the given nesting level, removing duplicates. 'keep' will stop collection at this level and let guides be placed alongside their plot. auto will allow guides to be collected if a upper level tries, but place them alongside the plot if not. If you modify default guide "position" with theme(legend.position=...) while also collecting guides you must apply that change to the overall patchwork (see example).

Currently ignored.

A plot from {ggstatsplot} package

Ignored

A data frame (or a tibble) from which variables specified are to be taken. Other data types (e.g., matrix,table, array, etc.) will not be accepted. Additionally, grouped data frames from {dplyr} should be ungrouped before they are entered as data.

The variable to use as the rows in the contingency table. Please note that if there are empty factor levels in your variable, they will be dropped.

The variable to use as the columns in the contingency table. Please note that if there are empty factor levels in your variable, they will be dropped. Default is NULL. If NULL, one-sample proportion test (a goodness of fit test) will be run for the x variable. Otherwise an appropriate association test will be run. This argument can not be NULL for ggbarstats function.

The variable in data containing counts, or NULL if each row represents a single observation.

A character specifying the type of statistical approach:

• "parametric"

• "nonparametric"

• "robust"

• "bayes"

You can specify just the initial letter.

Logical indicating whether data came from a within-subjects or repeated measures design study (Default: FALSE).

Decides whether the results of statistical tests are to be displayed as a subtitle (Default: TRUE). If set to FALSE, only the plot will be returned.

Character decides what information needs to be displayed on the label in each pie slice. Possible options are "percentage" (default), "counts", "both".

Additional aesthetic arguments that will be passed to ggplot2::geom_label().

Additional aesthetic arguments that will be passed to ggplot2::geom_text().

Number of digits for rounding or significant figures. May also be "signif" to return significant figures or "scientific" to return scientific notation. Control the number of digits by adding the value as suffix, e.g. digits = "scientific4" to have scientific notation with 4 decimal places, or digits = "signif5" for 5 significant figures (see also signif()).

Decides whether proportion test for x variable is to be carried out for each level of y. Defaults to results.subtitle. In ggbarstats, only p-values from this test will be displayed.

Numeric that decides number of decimal places for percentage labels (Default: 0L).

Logical that decides whether to display Bayes Factor in favor of the null hypothesis. This argument is relevant only for parametric test (Default: TRUE).

A vector of proportions: the expected proportions for the proportion test (should sum to 1). Default is NULL, which means the null is equal theoretical proportions across the levels of the nominal variable. E.g., ratio = c(0.5, 0.5) for two levels, ratio = c(0.25, 0.25, 0.25, 0.25) for four levels, etc.

Scalar between 0 and 1 (default: ⁠95%⁠ confidence/credible intervals, 0.95). If NULL, no confidence intervals will be computed.

Character describing the sampling plan. Possible options are "indepMulti" (independent multinomial; default), "poisson", "jointMulti" (joint multinomial), "hypergeom" (hypergeometric). For more, see ?BayesFactor::contingencyTableBF().

For the independent multinomial sampling plan, which margin is fixed ("rows" or "cols"). Defaults to "rows".

Specifies the prior concentration parameter, set to 1 by default. It indexes the expected deviation from the null hypothesis under the alternative, and corresponds to Gunel and Dickey's (1974) "a" parameter.

The text for the plot title.

The text for the plot subtitle. Will work only if results.subtitle = FALSE.

The text for the plot caption. This argument is relevant only if bf.message = FALSE.

Title text for the legend.

Label for x axis variable. If NULL (default), variable name for x will be used.

Labels for y axis variable. If NULL (default), variable name for y will be used.

A {ggplot2} theme. Default value is ggstatsplot::theme_ggstatsplot(). Any of the {ggplot2} themes (e.g., theme_bw()), or themes from extension packages are allowed (e.g., ggthemes::theme_fivethirtyeight(), hrbrthemes::theme_ipsum_ps(), etc.). But note that sometimes these themes will remove some of the details that {ggstatsplot} plots typically contains. For example, if relevant, ggbetweenstats() shows details about multiple comparison test as a label on the secondary Y-axis. Some themes (e.g. ggthemes::theme_fivethirtyeight()) will remove the secondary Y-axis and thus the details as well.

Name of the package from which the given palette is to be extracted. The available palettes and packages can be checked by running View(paletteer::palettes_d_names).

A ggplot component to be added to the plot prepared by {ggstatsplot}. This argument is primarily helpful for grouped_ variants of all primary functions. Default is NULL. The argument should be entered as a {ggplot2} function or a list of {ggplot2} functions.

Currently ignored.

A data frame (or a tibble) from which variables specified are to be taken. Other data types (e.g., matrix,table, array, etc.) will not be accepted. Additionally, grouped data frames from {dplyr} should be ungrouped before they are entered as data.

The grouping (or independent) variable from data. In case of a repeated measures or within-subjects design, if subject.id argument is not available or not explicitly specified, the function assumes that the data has already been sorted by such an id by the user and creates an internal identifier. So if your data is not sorted, the results can be inaccurate when there are more than two levels in x and there are NAs present. The data is expected to be sorted by user in subject-1,subject-2, ..., pattern.

The response (or outcome or dependent) variable from data.

A character specifying the type of statistical approach:

• "parametric"

• "nonparametric"

• "robust"

• "bayes"

You can specify just the initial letter.

Decides which pairwise comparisons to display. Available options are:

• "significant" (abbreviation accepted: "s")

• "non-significant" (abbreviation accepted: "ns")

• "all"

You can use this argument to make sure that your plot is not uber-cluttered when you have multiple groups being compared and scores of pairwise comparisons being displayed. If set to "none", no pairwise comparisons will be displayed.

Adjustment method for p-values for multiple comparisons. Possible methods are: "holm" (default), "hochberg", "hommel", "bonferroni", "BH", "BY", "fdr", "none".

Type of effect size needed for parametric tests. The argument can be "eta" (partial eta-squared) or "omega" (partial omega-squared).

A number between 0.5 and 2 (default 0.707), the prior width to use in calculating Bayes factors and posterior estimates. In addition to numeric arguments, several named values are also recognized: "medium", "wide", and "ultrawide", corresponding to r scale values of 1/2, sqrt(2)/2, and 1, respectively. In case of an ANOVA, this value corresponds to scale for fixed effects.

Logical that decides whether to display Bayes Factor in favor of the null hypothesis. This argument is relevant only for parametric test (Default: TRUE).

Decides whether the results of statistical tests are to be displayed as a subtitle (Default: TRUE). If set to FALSE, only the plot will be returned.

Label for x axis variable. If NULL (default), variable name for x will be used.

Labels for y axis variable. If NULL (default), variable name for y will be used.

The text for the plot caption. This argument is relevant only if bf.message = FALSE.

The text for the plot title.

The text for the plot subtitle. Will work only if results.subtitle = FALSE.

Number of digits for rounding or significant figures. May also be "signif" to return significant figures or "scientific" to return scientific notation. Control the number of digits by adding the value as suffix, e.g. digits = "scientific4" to have scientific notation with 4 decimal places, or digits = "signif5" for 5 significant figures (see also signif()).

a logical variable indicating whether to treat the two variances as being equal. If TRUE then the pooled variance is used to estimate the variance otherwise the Welch (or Satterthwaite) approximation to the degrees of freedom is used.

Scalar between 0 and 1 (default: ⁠95%⁠ confidence/credible intervals, 0.95). If NULL, no confidence intervals will be computed.

Number of bootstrap samples for computing confidence interval for the effect size (Default: 100L).

Trim level for the mean when carrying out robust tests. In case of an error, try reducing the value of tr, which is by default set to 0.2. Lowering the value might help.

Logical that decides whether centrality tendency measure is to be displayed as a point with a label (Default: TRUE). Function decides which central tendency measure to show depending on the type argument.

• mean for parametric statistics

• median for non-parametric statistics

• trimmed mean for robust statistics

• MAP estimator for Bayesian statistics

If you want default centrality parameter, you can specify this using centrality.type argument.

Decides which centrality parameter is to be displayed. The default is to choose the same as type argument. You can specify this to be:

• "parameteric" (for mean)

• "nonparametric" (for median)

• robust (for trimmed mean)

• bayes (for MAP estimator)

Just as type argument, abbreviations are also accepted.

A list of additional aesthetic arguments to be passed to ggplot2::geom_point() and ggrepel::geom_label_repel geoms, which are involved in mean plotting.

A list of additional aesthetic arguments to be passed to the ggplot2::geom_point() displaying the raw data.

A list of additional aesthetic arguments passed on to ggplot2::geom_boxplot().

A list of additional aesthetic arguments to be passed to the ggplot2::geom_violin().

A list of additional aesthetic arguments to be passed to ggsignif::geom_signif.

A {ggplot2} theme. Default value is ggstatsplot::theme_ggstatsplot(). Any of the {ggplot2} themes (e.g., theme_bw()), or themes from extension packages are allowed (e.g., ggthemes::theme_fivethirtyeight(), hrbrthemes::theme_ipsum_ps(), etc.). But note that sometimes these themes will remove some of the details that {ggstatsplot} plots typically contains. For example, if relevant, ggbetweenstats() shows details about multiple comparison test as a label on the secondary Y-axis. Some themes (e.g. ggthemes::theme_fivethirtyeight()) will remove the secondary Y-axis and thus the details as well.

Name of the package from which the given palette is to be extracted. The available palettes and packages can be checked by running View(paletteer::palettes_d_names).

A ggplot component to be added to the plot prepared by {ggstatsplot}. This argument is primarily helpful for grouped_ variants of all primary functions. Default is NULL. The argument should be entered as a {ggplot2} function or a list of {ggplot2} functions.

Currently ignored.

A model object to be tidied, or a tidy data frame from a regression model. Function internally uses parameters::model_parameters() to get a tidy data frame. If a data frame, it must contain at the minimum two columns named term (names of predictors) and estimate (corresponding estimates of coefficients or other quantities of interest).

Relevant statistic for the model ("t", "f", "z", or "chi") in the label. Relevant only if x is a data frame.

Logical. Decides whether to display confidence intervals as error bars (Default: TRUE).

Numeric deciding level of confidence or credible intervals (Default: 0.95).

Number of digits for rounding or significant figures. May also be "signif" to return significant figures or "scientific" to return scientific notation. Control the number of digits by adding the value as suffix, e.g. digits = "scientific4" to have scientific notation with 4 decimal places, or digits = "signif5" for 5 significant figures (see also signif()).

Logical that decides whether the intercept should be excluded from the plot (Default: FALSE).

This is the same as effectsize_type argument of parameters::model_parameters(). Defaults to "eta", and relevant for ANOVA-like objects.

Logical that decides whether subtitle for meta-analysis via linear (mixed-effects) models (default: FALSE). If TRUE, input to argument subtitle will be ignored. This will be mostly relevant if a data frame with estimates and their standard errors is entered.

Type of statistics used to carry out random-effects meta-analysis. If "parametric" (default), metafor::rma function will be used. If "robust", metaplus::metaplus function will be used. If "bayes", metaBMA::meta_random function will be used.

Logical that decides whether results from running a Bayesian meta-analysis assuming that the effect size d varies across studies with standard deviation t (i.e., a random-effects analysis) should be displayed in caption. Defaults to TRUE.

If "none" (default) do not sort, "ascending" sort by increasing coefficient value, or "descending" sort by decreasing coefficient value.

Label for x axis variable. If NULL (default), variable name for x will be used.

Labels for y axis variable. If NULL (default), variable name for y will be used.

The text for the plot title.

The text for the plot subtitle. The input to this argument will be ignored if meta.analytic.effect is set to TRUE.

The text for the plot caption. This argument is relevant only if bf.message = FALSE.

If TRUE, only stats labels for significant effects is shown (Default: FALSE). This can be helpful when a large number of regression coefficients are to be displayed in a single plot.

Additional arguments that will be passed to geom_point geom. Please see documentation for that function to know more about these arguments.

Additional arguments that will be passed to geom_errorbarh geom. Please see documentation for that function to know more about these arguments.

Decides whether to display a vertical line (Default: "TRUE").

Additional arguments that will be passed to geom_vline geom. Please see documentation for that function to know more about these arguments.

Logical. Decides whether the statistic and p-values for each coefficient are to be attached to each dot as a text label using ggrepel (Default: TRUE).

Color for the labels. If set to NULL, colors will be chosen from the specified package (Default: "RColorBrewer") and palette (Default: "Dark2").

Additional arguments that will be passed to ggrepel::geom_label_repel(). Please see documentation for that function to know more about these arguments.

Name of the package from which the given palette is to be extracted. The available palettes and packages can be checked by running View(paletteer::palettes_d_names).

A {ggplot2} theme. Default value is ggstatsplot::theme_ggstatsplot(). Any of the {ggplot2} themes (e.g., theme_bw()), or themes from extension packages are allowed (e.g., ggthemes::theme_fivethirtyeight(), hrbrthemes::theme_ipsum_ps(), etc.). But note that sometimes these themes will remove some of the details that {ggstatsplot} plots typically contains. For example, if relevant, ggbetweenstats() shows details about multiple comparison test as a label on the secondary Y-axis. Some themes (e.g. ggthemes::theme_fivethirtyeight()) will remove the secondary Y-axis and thus the details as well.

Additional arguments to tidying method. For more, see parameters::model_parameters.

A data frame from which variables specified are to be taken.

List of variables for which the correlation matrix is to be computed and visualized. If NULL (default), all numeric variables from data will be used.

Optional list of names to be used for cor.vars. The names should be entered in the same order.

Character, "upper" (default), "lower", or "full", display full matrix, lower triangular or upper triangular matrix.

A character specifying the type of statistical approach:

• "parametric"

• "nonparametric"

• "robust"

• "bayes"

You can specify just the initial letter.

Trim level for the mean when carrying out robust tests. In case of an error, try reducing the value of tr, which is by default set to 0.2. Lowering the value might help.

Can be TRUE for partial correlations. For Bayesian partial correlations, "full" instead of pseudo-Bayesian partial correlations (i.e., Bayesian correlation based on frequentist partialization) are returned.

Number of digits for rounding or significant figures. May also be "signif" to return significant figures or "scientific" to return scientific notation. Control the number of digits by adding the value as suffix, e.g. digits = "scientific4" to have scientific notation with 4 decimal places, or digits = "signif5" for 5 significant figures (see also signif()).

Significance level (Default: 0.05). If the p-value in p-value matrix is bigger than sig.level, then the corresponding correlation coefficient is regarded as insignificant and flagged as such in the plot.

Scalar between 0 and 1 (default: ⁠95%⁠ confidence/credible intervals, 0.95). If NULL, no confidence intervals will be computed.

A number between 0.5 and 2 (default 0.707), the prior width to use in calculating Bayes factors and posterior estimates. In addition to numeric arguments, several named values are also recognized: "medium", "wide", and "ultrawide", corresponding to r scale values of 1/2, sqrt(2)/2, and 1, respectively. In case of an ANOVA, this value corresponds to scale for fixed effects.

Adjustment method for p-values for multiple comparisons. Possible methods are: "holm" (default), "hochberg", "hommel", "bonferroni", "BH", "BY", "fdr", "none".

Decides the point shape to be used for insignificant correlation coefficients (only valid when insig = "pch"). Default: pch = "cross".

A list of additional (mostly aesthetic) arguments that will be passed to ggcorrplot::ggcorrplot() function. The list should avoid any of the following arguments since they are already internally being used: corr, method, p.mat, sig.level, ggtheme, colors, lab, pch, legend.title, digits.

Name of the package from which the given palette is to be extracted. The available palettes and packages can be checked by running View(paletteer::palettes_d_names).

A vector of 3 colors for low, mid, and high correlation values. If set to NULL, manual specification of colors will be turned off and 3 colors from the specified palette from package will be selected.

A {ggplot2} theme. Default value is ggstatsplot::theme_ggstatsplot(). Any of the {ggplot2} themes (e.g., theme_bw()), or themes from extension packages are allowed (e.g., ggthemes::theme_fivethirtyeight(), hrbrthemes::theme_ipsum_ps(), etc.). But note that sometimes these themes will remove some of the details that {ggstatsplot} plots typically contains. For example, if relevant, ggbetweenstats() shows details about multiple comparison test as a label on the secondary Y-axis. Some themes (e.g. ggthemes::theme_fivethirtyeight()) will remove the secondary Y-axis and thus the details as well.

A ggplot component to be added to the plot prepared by {ggstatsplot}. This argument is primarily helpful for grouped_ variants of all primary functions. Default is NULL. The argument should be entered as a {ggplot2} function or a list of {ggplot2} functions.

The text for the plot title.

The text for the plot subtitle. Will work only if results.subtitle = FALSE.

The text for the plot caption. This argument is relevant only if bf.message = FALSE.

Currently ignored.

A data frame (or a tibble) from which variables specified are to be taken. Other data types (e.g., matrix,table, array, etc.) will not be accepted. Additionally, grouped data frames from {dplyr} should be ungrouped before they are entered as data.

A numeric variable from the data frame data.

Label or grouping variable.

Label for x axis variable. If NULL (default), variable name for x will be used.

Labels for y axis variable. If NULL (default), variable name for y will be used.

The text for the plot title.

The text for the plot subtitle. Will work only if results.subtitle = FALSE.

The text for the plot caption. This argument is relevant only if bf.message = FALSE.

A character specifying the type of statistical approach:

• "parametric"

• "nonparametric"

• "robust"

• "bayes"

You can specify just the initial letter.

A number indicating the true value of the mean (Default: 0).

A number between 0.5 and 2 (default 0.707), the prior width to use in calculating Bayes factors and posterior estimates. In addition to numeric arguments, several named values are also recognized: "medium", "wide", and "ultrawide", corresponding to r scale values of 1/2, sqrt(2)/2, and 1, respectively. In case of an ANOVA, this value corresponds to scale for fixed effects.

Logical that decides whether to display Bayes Factor in favor of the null hypothesis. This argument is relevant only for parametric test (Default: TRUE).

Type of effect size needed for parametric tests. The argument can be "d" (for Cohen's d) or "g" (for Hedge's g).

Scalar between 0 and 1 (default: ⁠95%⁠ confidence/credible intervals, 0.95). If NULL, no confidence intervals will be computed.

Trim level for the mean when carrying out robust tests. In case of an error, try reducing the value of tr, which is by default set to 0.2. Lowering the value might help.

Number of digits for rounding or significant figures. May also be "signif" to return significant figures or "scientific" to return scientific notation. Control the number of digits by adding the value as suffix, e.g. digits = "scientific4" to have scientific notation with 4 decimal places, or digits = "signif5" for 5 significant figures (see also signif()).

Decides whether the results of statistical tests are to be displayed as a subtitle (Default: TRUE). If set to FALSE, only the plot will be returned.

A list of additional aesthetic arguments passed to geom_point.

Logical that decides whether centrality tendency measure is to be displayed as a point with a label (Default: TRUE). Function decides which central tendency measure to show depending on the type argument.

• mean for parametric statistics

• median for non-parametric statistics

• trimmed mean for robust statistics

• MAP estimator for Bayesian statistics

If you want default centrality parameter, you can specify this using centrality.type argument.

Decides which centrality parameter is to be displayed. The default is to choose the same as type argument. You can specify this to be:

• "parameteric" (for mean)

• "nonparametric" (for median)

• robust (for trimmed mean)

• bayes (for MAP estimator)

Just as type argument, abbreviations are also accepted.

A list of additional aesthetic arguments to be passed to the geom_line used to display the lines corresponding to the centrality parameter.

A ggplot component to be added to the plot prepared by {ggstatsplot}. This argument is primarily helpful for grouped_ variants of all primary functions. Default is NULL. The argument should be entered as a {ggplot2} function or a list of {ggplot2} functions.

A {ggplot2} theme. Default value is ggstatsplot::theme_ggstatsplot(). Any of the {ggplot2} themes (e.g., theme_bw()), or themes from extension packages are allowed (e.g., ggthemes::theme_fivethirtyeight(), hrbrthemes::theme_ipsum_ps(), etc.). But note that sometimes these themes will remove some of the details that {ggstatsplot} plots typically contains. For example, if relevant, ggbetweenstats() shows details about multiple comparison test as a label on the secondary Y-axis. Some themes (e.g. ggthemes::theme_fivethirtyeight()) will remove the secondary Y-axis and thus the details as well.

Currently ignored.

A data frame (or a tibble) from which variables specified are to be taken. Other data types (e.g., matrix,table, array, etc.) will not be accepted. Additionally, grouped data frames from {dplyr} should be ungrouped before they are entered as data.

A numeric variable from the data frame data.

The width of the histogram bins. Can be specified as a numeric value, or a function that calculates width from x. The default is to use the max(x) - min(x) / sqrt(N). You should always check this value and explore multiple widths to find the best to illustrate the stories in your data.

Label for x axis variable. If NULL (default), variable name for x will be used.

The text for the plot title.

The text for the plot subtitle. Will work only if results.subtitle = FALSE.

The text for the plot caption. This argument is relevant only if bf.message = FALSE.

A character specifying the type of statistical approach:

• "parametric"

• "nonparametric"

• "robust"

• "bayes"

You can specify just the initial letter.

A number indicating the true value of the mean (Default: 0).

A number between 0.5 and 2 (default 0.707), the prior width to use in calculating Bayes factors and posterior estimates. In addition to numeric arguments, several named values are also recognized: "medium", "wide", and "ultrawide", corresponding to r scale values of 1/2, sqrt(2)/2, and 1, respectively. In case of an ANOVA, this value corresponds to scale for fixed effects.

Logical that decides whether to display Bayes Factor in favor of the null hypothesis. This argument is relevant only for parametric test (Default: TRUE).

Type of effect size needed for parametric tests. The argument can be "d" (for Cohen's d) or "g" (for Hedge's g).

Scalar between 0 and 1 (default: ⁠95%⁠ confidence/credible intervals, 0.95). If NULL, no confidence intervals will be computed.

Trim level for the mean when carrying out robust tests. In case of an error, try reducing the value of tr, which is by default set to 0.2. Lowering the value might help.

Number of digits for rounding or significant figures. May also be "signif" to return significant figures or "scientific" to return scientific notation. Control the number of digits by adding the value as suffix, e.g. digits = "scientific4" to have scientific notation with 4 decimal places, or digits = "signif5" for 5 significant figures (see also signif()).

A {ggplot2} theme. Default value is ggstatsplot::theme_ggstatsplot(). Any of the {ggplot2} themes (e.g., theme_bw()), or themes from extension packages are allowed (e.g., ggthemes::theme_fivethirtyeight(), hrbrthemes::theme_ipsum_ps(), etc.). But note that sometimes these themes will remove some of the details that {ggstatsplot} plots typically contains. For example, if relevant, ggbetweenstats() shows details about multiple comparison test as a label on the secondary Y-axis. Some themes (e.g. ggthemes::theme_fivethirtyeight()) will remove the secondary Y-axis and thus the details as well.

Decides whether the results of statistical tests are to be displayed as a subtitle (Default: TRUE). If set to FALSE, only the plot will be returned.

A list of additional aesthetic arguments to be passed to the stat_bin used to display the bins. Do not specify binwidth argument in this list since it has already been specified using the dedicated argument.

Logical that decides whether centrality tendency measure is to be displayed as a point with a label (Default: TRUE). Function decides which central tendency measure to show depending on the type argument.

• mean for parametric statistics

• median for non-parametric statistics

• trimmed mean for robust statistics

• MAP estimator for Bayesian statistics

If you want default centrality parameter, you can specify this using centrality.type argument.

Decides which centrality parameter is to be displayed. The default is to choose the same as type argument. You can specify this to be:

• "parameteric" (for mean)

• "nonparametric" (for median)

• robust (for trimmed mean)

• bayes (for MAP estimator)

Just as type argument, abbreviations are also accepted.

A list of additional aesthetic arguments to be passed to the geom_line used to display the lines corresponding to the centrality parameter.

A ggplot component to be added to the plot prepared by {ggstatsplot}. This argument is primarily helpful for grouped_ variants of all primary functions. Default is NULL. The argument should be entered as a {ggplot2} function or a list of {ggplot2} functions.

Currently ignored.

A data frame (or a tibble) from which variables specified are to be taken. Other data types (e.g., matrix,table, array, etc.) will not be accepted. Additionally, grouped data frames from {dplyr} should be ungrouped before they are entered as data.

The variable to use as the rows in the contingency table. Please note that if there are empty factor levels in your variable, they will be dropped.

The variable to use as the columns in the contingency table. Please note that if there are empty factor levels in your variable, they will be dropped. Default is NULL. If NULL, one-sample proportion test (a goodness of fit test) will be run for the x variable. Otherwise an appropriate association test will be run. This argument can not be NULL for ggbarstats function.

The variable in data containing counts, or NULL if each row represents a single observation.

A character specifying the type of statistical approach:

• "parametric"

• "nonparametric"

• "robust"

• "bayes"

You can specify just the initial letter.

Logical indicating whether data came from a within-subjects or repeated measures design study (Default: FALSE).

Decides whether the results of statistical tests are to be displayed as a subtitle (Default: TRUE). If set to FALSE, only the plot will be returned.

Character decides what information needs to be displayed on the label in each pie slice. Possible options are "percentage" (default), "counts", "both".

Additional aesthetic arguments that will be passed to ggplot2::geom_label().

Whether labels should be repelled using {ggrepel} package. This can be helpful in case the labels are overlapping.

Number of digits for rounding or significant figures. May also be "signif" to return significant figures or "scientific" to return scientific notation. Control the number of digits by adding the value as suffix, e.g. digits = "scientific4" to have scientific notation with 4 decimal places, or digits = "signif5" for 5 significant figures (see also signif()).

Decides whether proportion test for x variable is to be carried out for each level of y. Defaults to results.subtitle. In ggbarstats, only p-values from this test will be displayed.

Numeric that decides number of decimal places for percentage labels (Default: 0L).

Logical that decides whether to display Bayes Factor in favor of the null hypothesis. This argument is relevant only for parametric test (Default: TRUE).

A vector of proportions: the expected proportions for the proportion test (should sum to 1). Default is NULL, which means the null is equal theoretical proportions across the levels of the nominal variable. E.g., ratio = c(0.5, 0.5) for two levels, ratio = c(0.25, 0.25, 0.25, 0.25) for four levels, etc.

Scalar between 0 and 1 (default: ⁠95%⁠ confidence/credible intervals, 0.95). If NULL, no confidence intervals will be computed.

Character describing the sampling plan. Possible options are "indepMulti" (independent multinomial; default), "poisson", "jointMulti" (joint multinomial), "hypergeom" (hypergeometric). For more, see ?BayesFactor::contingencyTableBF().

For the independent multinomial sampling plan, which margin is fixed ("rows" or "cols"). Defaults to "rows".

Specifies the prior concentration parameter, set to 1 by default. It indexes the expected deviation from the null hypothesis under the alternative, and corresponds to Gunel and Dickey's (1974) "a" parameter.

The text for the plot title.

The text for the plot subtitle. Will work only if results.subtitle = FALSE.

The text for the plot caption. This argument is relevant only if bf.message = FALSE.

Title text for the legend.

A {ggplot2} theme. Default value is ggstatsplot::theme_ggstatsplot(). Any of the {ggplot2} themes (e.g., theme_bw()), or themes from extension packages are allowed (e.g., ggthemes::theme_fivethirtyeight(), hrbrthemes::theme_ipsum_ps(), etc.). But note that sometimes these themes will remove some of the details that {ggstatsplot} plots typically contains. For example, if relevant, ggbetweenstats() shows details about multiple comparison test as a label on the secondary Y-axis. Some themes (e.g. ggthemes::theme_fivethirtyeight()) will remove the secondary Y-axis and thus the details as well.

Name of the package from which the given palette is to be extracted. The available palettes and packages can be checked by running View(paletteer::palettes_d_names).

A ggplot component to be added to the plot prepared by {ggstatsplot}. This argument is primarily helpful for grouped_ variants of all primary functions. Default is NULL. The argument should be entered as a {ggplot2} function or a list of {ggplot2} functions.

Currently ignored.

A data frame (or a tibble) from which variables specified are to be taken. Other data types (e.g., matrix,table, array, etc.) will not be accepted. Additionally, grouped data frames from {dplyr} should be ungrouped before they are entered as data.

The column in data containing the explanatory variable to be plotted on the x-axis.

The column in data containing the response (outcome) variable to be plotted on the y-axis.

A character specifying the type of statistical approach:

• "parametric"

• "nonparametric"

• "robust"

• "bayes"

You can specify just the initial letter.

Scalar between 0 and 1 (default: ⁠95%⁠ confidence/credible intervals, 0.95). If NULL, no confidence intervals will be computed.

A number between 0.5 and 2 (default 0.707), the prior width to use in calculating Bayes factors and posterior estimates. In addition to numeric arguments, several named values are also recognized: "medium", "wide", and "ultrawide", corresponding to r scale values of 1/2, sqrt(2)/2, and 1, respectively. In case of an ANOVA, this value corresponds to scale for fixed effects.

Logical that decides whether to display Bayes Factor in favor of the null hypothesis. This argument is relevant only for parametric test (Default: TRUE).

Trim level for the mean when carrying out robust tests. In case of an error, try reducing the value of tr, which is by default set to 0.2. Lowering the value might help.

Number of digits for rounding or significant figures. May also be "signif" to return significant figures or "scientific" to return scientific notation. Control the number of digits by adding the value as suffix, e.g. digits = "scientific4" to have scientific notation with 4 decimal places, or digits = "signif5" for 5 significant figures (see also signif()).

Decides whether the results of statistical tests are to be displayed as a subtitle (Default: TRUE). If set to FALSE, only the plot will be returned.

Variable to use for points labels entered as a symbol (e.g. var1).

An expression evaluating to a logical vector that determines the subset of data points to label (e.g. y < 4 & z < 20). While using this argument with purrr::pmap(), you will have to provide a quoted expression (e.g. quote(y < 4 & z < 20)).

Decides whether marginal distributions will be plotted on axes using ggside functions. The default is TRUE. The package ggside must already be installed by the user.

A list of additional aesthetic arguments to be passed to geom_point geom used to display the raw data points.

Degree of jitter in x and y direction, respectively. Defaults to 0 (0%) of the resolution of the data. Note that the jitter should not be specified in the point.args because this information will be passed to two different geoms: one displaying the points and the other displaying the *labels for these points.

A list of additional aesthetic arguments to be passed to ggrepel::geom_label_repel geom used to display the labels.

A list of additional aesthetic arguments to be passed to geom_smooth geom used to display the regression line.

A list of arguments passed to respective geom_s from the {ggside} package to change the marginal distribution histograms plots.

Label for x axis variable. If NULL (default), variable name for x will be used.

Labels for y axis variable. If NULL (default), variable name for y will be used.

The text for the plot title.

The text for the plot subtitle. Will work only if results.subtitle = FALSE.

The text for the plot caption. This argument is relevant only if bf.message = FALSE.

A {ggplot2} theme. Default value is ggstatsplot::theme_ggstatsplot(). Any of the {ggplot2} themes (e.g., theme_bw()), or themes from extension packages are allowed (e.g., ggthemes::theme_fivethirtyeight(), hrbrthemes::theme_ipsum_ps(), etc.). But note that sometimes these themes will remove some of the details that {ggstatsplot} plots typically contains. For example, if relevant, ggbetweenstats() shows details about multiple comparison test as a label on the secondary Y-axis. Some themes (e.g. ggthemes::theme_fivethirtyeight()) will remove the secondary Y-axis and thus the details as well.

A ggplot component to be added to the plot prepared by {ggstatsplot}. This argument is primarily helpful for grouped_ variants of all primary functions. Default is NULL. The argument should be entered as a {ggplot2} function or a list of {ggplot2} functions.

Currently ignored.

A data frame (or a tibble) from which variables specified are to be taken. Other data types (e.g., matrix,table, array, etc.) will not be accepted. Additionally, grouped data frames from {dplyr} should be ungrouped before they are entered as data.

The grouping (or independent) variable from data. In case of a repeated measures or within-subjects design, if subject.id argument is not available or not explicitly specified, the function assumes that the data has already been sorted by such an id by the user and creates an internal identifier. So if your data is not sorted, the results can be inaccurate when there are more than two levels in x and there are NAs present. The data is expected to be sorted by user in subject-1,subject-2, ..., pattern.

The response (or outcome or dependent) variable from data.

A character specifying the type of statistical approach:

• "parametric"

• "nonparametric"

• "robust"

• "bayes"

You can specify just the initial letter.

Decides which pairwise comparisons to display. Available options are:

• "significant" (abbreviation accepted: "s")

• "non-significant" (abbreviation accepted: "ns")

• "all"

You can use this argument to make sure that your plot is not uber-cluttered when you have multiple groups being compared and scores of pairwise comparisons being displayed. If set to "none", no pairwise comparisons will be displayed.

Adjustment method for p-values for multiple comparisons. Possible methods are: "holm" (default), "hochberg", "hommel", "bonferroni", "BH", "BY", "fdr", "none".

Type of effect size needed for parametric tests. The argument can be "eta" (partial eta-squared) or "omega" (partial omega-squared).

A number between 0.5 and 2 (default 0.707), the prior width to use in calculating Bayes factors and posterior estimates. In addition to numeric arguments, several named values are also recognized: "medium", "wide", and "ultrawide", corresponding to r scale values of 1/2, sqrt(2)/2, and 1, respectively. In case of an ANOVA, this value corresponds to scale for fixed effects.

Logical that decides whether to display Bayes Factor in favor of the null hypothesis. This argument is relevant only for parametric test (Default: TRUE).

Decides whether the results of statistical tests are to be displayed as a subtitle (Default: TRUE). If set to FALSE, only the plot will be returned.

Label for x axis variable. If NULL (default), variable name for x will be used.

Labels for y axis variable. If NULL (default), variable name for y will be used.

The text for the plot caption. This argument is relevant only if bf.message = FALSE.

The text for the plot title.

The text for the plot subtitle. Will work only if results.subtitle = FALSE.

Number of digits for rounding or significant figures. May also be "signif" to return significant figures or "scientific" to return scientific notation. Control the number of digits by adding the value as suffix, e.g. digits = "scientific4" to have scientific notation with 4 decimal places, or digits = "signif5" for 5 significant figures (see also signif()).

Scalar between 0 and 1 (default: ⁠95%⁠ confidence/credible intervals, 0.95). If NULL, no confidence intervals will be computed.

Number of bootstrap samples for computing confidence interval for the effect size (Default: 100L).

Trim level for the mean when carrying out robust tests. In case of an error, try reducing the value of tr, which is by default set to 0.2. Lowering the value might help.

Logical that decides whether centrality tendency measure is to be displayed as a point with a label (Default: TRUE). Function decides which central tendency measure to show depending on the type argument.

• mean for parametric statistics

• median for non-parametric statistics

• trimmed mean for robust statistics

• MAP estimator for Bayesian statistics

If you want default centrality parameter, you can specify this using centrality.type argument.

Decides which centrality parameter is to be displayed. The default is to choose the same as type argument. You can specify this to be:

• "parameteric" (for mean)

• "nonparametric" (for median)

• robust (for trimmed mean)

• bayes (for MAP estimator)

Just as type argument, abbreviations are also accepted.

A list of additional aesthetic arguments to be passed to ggplot2::geom_point() and ggrepel::geom_label_repel geoms, which are involved in mean plotting.

A list of additional aesthetic arguments passed on to ggplot2::geom_path() connecting raw data points and mean points.

A list of additional aesthetic arguments to be passed to the ggplot2::geom_point() displaying the raw data.

Logical that decides whether individual data points and means, respectively, should be connected using ggplot2::geom_path(). Both default to TRUE. Note that point.path argument is relevant only when there are two groups (i.e., in case of a t-test). In case of large number of data points, it is advisable to set point.path = FALSE as these lines can overwhelm the plot.

A list of additional aesthetic arguments passed on to ggplot2::geom_boxplot().

A list of additional aesthetic arguments to be passed to the ggplot2::geom_violin().

A list of additional aesthetic arguments to be passed to ggsignif::geom_signif.

A {ggplot2} theme. Default value is ggstatsplot::theme_ggstatsplot(). Any of the {ggplot2} themes (e.g., theme_bw()), or themes from extension packages are allowed (e.g., ggthemes::theme_fivethirtyeight(), hrbrthemes::theme_ipsum_ps(), etc.). But note that sometimes these themes will remove some of the details that {ggstatsplot} plots typically contains. For example, if relevant, ggbetweenstats() shows details about multiple comparison test as a label on the secondary Y-axis. Some themes (e.g. ggthemes::theme_fivethirtyeight()) will remove the secondary Y-axis and thus the details as well.

Name of the package from which the given palette is to be extracted. The available palettes and packages can be checked by running View(paletteer::palettes_d_names).

A ggplot component to be added to the plot prepared by {ggstatsplot}. This argument is primarily helpful for grouped_ variants of all primary functions. Default is NULL. The argument should be entered as a {ggplot2} function or a list of {ggplot2} functions.

Currently ignored.

A data frame (or a tibble) from which variables specified are to be taken. Other data types (e.g., matrix,table, array, etc.) will not be accepted. Additionally, grouped data frames from {dplyr} should be ungrouped before they are entered as data.

Arguments passed on to ggbarstats

sample.size.label.args

Additional aesthetic arguments that will be passed to ggplot2::geom_text().

x

The variable to use as the rows in the contingency table. Please note that if there are empty factor levels in your variable, they will be dropped.

y

The variable to use as the columns in the contingency table. Please note that if there are empty factor levels in your variable, they will be dropped. Default is NULL. If NULL, one-sample proportion test (a goodness of fit test) will be run for the x variable. Otherwise an appropriate association test will be run. This argument can not be NULL for ggbarstats function.

proportion.test

Decides whether proportion test for x variable is to be carried out for each level of y. Defaults to results.subtitle. In ggbarstats, only p-values from this test will be displayed.

digits.perc

Numeric that decides number of decimal places for percentage labels (Default: 0L).

label

Character decides what information needs to be displayed on the label in each pie slice. Possible options are "percentage" (default), "counts", "both".

label.args

Additional aesthetic arguments that will be passed to ggplot2::geom_label().

legend.title

Title text for the legend.

bf.message

Logical that decides whether to display Bayes Factor in favor of the null hypothesis. This argument is relevant only for parametric test (Default: TRUE).

results.subtitle

Decides whether the results of statistical tests are to be displayed as a subtitle (Default: TRUE). If set to FALSE, only the plot will be returned.

subtitle

The text for the plot subtitle. Will work only if results.subtitle = FALSE.

caption

The text for the plot caption. This argument is relevant only if bf.message = FALSE.

ggplot.component

A ggplot component to be added to the plot prepared by {ggstatsplot}. This argument is primarily helpful for grouped_ variants of all primary functions. Default is NULL. The argument should be entered as a {ggplot2} function or a list of {ggplot2} functions.

package,palette

Name of the package from which the given palette is to be extracted. The available palettes and packages can be checked by running View(paletteer::palettes_d_names).

ggtheme

A {ggplot2} theme. Default value is ggstatsplot::theme_ggstatsplot(). Any of the {ggplot2} themes (e.g., theme_bw()), or themes from extension packages are allowed (e.g., ggthemes::theme_fivethirtyeight(), hrbrthemes::theme_ipsum_ps(), etc.). But note that sometimes these themes will remove some of the details that {ggstatsplot} plots typically contains. For example, if relevant, ggbetweenstats() shows details about multiple comparison test as a label on the secondary Y-axis. Some themes (e.g. ggthemes::theme_fivethirtyeight()) will remove the secondary Y-axis and thus the details as well.

type

A character specifying the type of statistical approach:

• "parametric"

• "nonparametric"

• "robust"

• "bayes"

You can specify just the initial letter.

digits

Number of digits for rounding or significant figures. May also be "signif" to return significant figures or "scientific" to return scientific notation. Control the number of digits by adding the value as suffix, e.g. digits = "scientific4" to have scientific notation with 4 decimal places, or digits = "signif5" for 5 significant figures (see also signif()).

conf.level

Scalar between 0 and 1 (default: ⁠95%⁠ confidence/credible intervals, 0.95). If NULL, no confidence intervals will be computed.

paired

Logical indicating whether data came from a within-subjects or repeated measures design study (Default: FALSE).

counts

The variable in data containing counts, or NULL if each row represents a single observation.

ratio

A vector of proportions: the expected proportions for the proportion test (should sum to 1). Default is NULL, which means the null is equal theoretical proportions across the levels of the nominal variable. E.g., ratio = c(0.5, 0.5) for two levels, ratio = c(0.25, 0.25, 0.25, 0.25) for four levels, etc.

sampling.plan

Character describing the sampling plan. Possible options are "indepMulti" (independent multinomial; default), "poisson", "jointMulti" (joint multinomial), "hypergeom" (hypergeometric). For more, see ?BayesFactor::contingencyTableBF().

fixed.margin

For the independent multinomial sampling plan, which margin is fixed ("rows" or "cols"). Defaults to "rows".

prior.concentration

Specifies the prior concentration parameter, set to 1 by default. It indexes the expected deviation from the null hypothesis under the alternative, and corresponds to Gunel and Dickey's (1974) "a" parameter.

xlab

Label for x axis variable. If NULL (default), variable name for x will be used.

ylab

Labels for y axis variable. If NULL (default), variable name for y will be used.

A single grouping variable.

A list of additional arguments passed to patchwork::wrap_plots(), except for guides argument which is already separately specified here.

A list of additional arguments passed to patchwork::plot_annotation().

A data frame (or a tibble) from which variables specified are to be taken. Other data types (e.g., matrix,table, array, etc.) will not be accepted. Additionally, grouped data frames from {dplyr} should be ungrouped before they are entered as data.

Arguments passed on to ggbetweenstats

xlab

Label for x axis variable. If NULL (default), variable name for x will be used.

ylab

Labels for y axis variable. If NULL (default), variable name for y will be used.

p.adjust.method

Adjustment method for p-values for multiple comparisons. Possible methods are: "holm" (default), "hochberg", "hommel", "bonferroni", "BH", "BY", "fdr", "none".

pairwise.display

Decides which pairwise comparisons to display. Available options are:

• "significant" (abbreviation accepted: "s")

• "non-significant" (abbreviation accepted: "ns")

• "all"

You can use this argument to make sure that your plot is not uber-cluttered when you have multiple groups being compared and scores of pairwise comparisons being displayed. If set to "none", no pairwise comparisons will be displayed.

bf.message

Logical that decides whether to display Bayes Factor in favor of the null hypothesis. This argument is relevant only for parametric test (Default: TRUE).

results.subtitle

Decides whether the results of statistical tests are to be displayed as a subtitle (Default: TRUE). If set to FALSE, only the plot will be returned.

subtitle

The text for the plot subtitle. Will work only if results.subtitle = FALSE.

caption

The text for the plot caption. This argument is relevant only if bf.message = FALSE.

centrality.plotting

Logical that decides whether centrality tendency measure is to be displayed as a point with a label (Default: TRUE). Function decides which central tendency measure to show depending on the type argument.

• mean for parametric statistics

• median for non-parametric statistics

• trimmed mean for robust statistics

• MAP estimator for Bayesian statistics

If you want default centrality parameter, you can specify this using centrality.type argument.

centrality.type

Decides which centrality parameter is to be displayed. The default is to choose the same as type argument. You can specify this to be:

• "parameteric" (for mean)

• "nonparametric" (for median)

• robust (for trimmed mean)

• bayes (for MAP estimator)

Just as type argument, abbreviations are also accepted.

point.args

A list of additional aesthetic arguments to be passed to the ggplot2::geom_point() displaying the raw data.

boxplot.args

A list of additional aesthetic arguments passed on to ggplot2::geom_boxplot().

violin.args

A list of additional aesthetic arguments to be passed to the ggplot2::geom_violin().

ggplot.component

A ggplot component to be added to the plot prepared by {ggstatsplot}. This argument is primarily helpful for grouped_ variants of all primary functions. Default is NULL. The argument should be entered as a {ggplot2} function or a list of {ggplot2} functions.

package,palette

Name of the package from which the given palette is to be extracted. The available palettes and packages can be checked by running View(paletteer::palettes_d_names).

centrality.point.args,centrality.label.args

A list of additional aesthetic arguments to be passed to ggplot2::geom_point() and ggrepel::geom_label_repel geoms, which are involved in mean plotting.

ggsignif.args

A list of additional aesthetic arguments to be passed to ggsignif::geom_signif.

ggtheme

A {ggplot2} theme. Default value is ggstatsplot::theme_ggstatsplot(). Any of the {ggplot2} themes (e.g., theme_bw()), or themes from extension packages are allowed (e.g., ggthemes::theme_fivethirtyeight(), hrbrthemes::theme_ipsum_ps(), etc.). But note that sometimes these themes will remove some of the details that {ggstatsplot} plots typically contains. For example, if relevant, ggbetweenstats() shows details about multiple comparison test as a label on the secondary Y-axis. Some themes (e.g. ggthemes::theme_fivethirtyeight()) will remove the secondary Y-axis and thus the details as well.

x

The grouping (or independent) variable from data. In case of a repeated measures or within-subjects design, if subject.id argument is not available or not explicitly specified, the function assumes that the data has already been sorted by such an id by the user and creates an internal identifier. So if your data is not sorted, the results can be inaccurate when there are more than two levels in x and there are NAs present. The data is expected to be sorted by user in subject-1,subject-2, ..., pattern.

y

The response (or outcome or dependent) variable from data.

type

A character specifying the type of statistical approach:

• "parametric"

• "nonparametric"

• "robust"

• "bayes"

You can specify just the initial letter.

digits

Number of digits for rounding or significant figures. May also be "signif" to return significant figures or "scientific" to return scientific notation. Control the number of digits by adding the value as suffix, e.g. digits = "scientific4" to have scientific notation with 4 decimal places, or digits = "signif5" for 5 significant figures (see also signif()).

conf.level

Scalar between 0 and 1 (default: ⁠95%⁠ confidence/credible intervals, 0.95). If NULL, no confidence intervals will be computed.

effsize.type

Type of effect size needed for parametric tests. The argument can be "eta" (partial eta-squared) or "omega" (partial omega-squared).

var.equal

a logical variable indicating whether to treat the two variances as being equal. If TRUE then the pooled variance is used to estimate the variance otherwise the Welch (or Satterthwaite) approximation to the degrees of freedom is used.

bf.prior

A number between 0.5 and 2 (default 0.707), the prior width to use in calculating Bayes factors and posterior estimates. In addition to numeric arguments, several named values are also recognized: "medium", "wide", and "ultrawide", corresponding to r scale values of 1/2, sqrt(2)/2, and 1, respectively. In case of an ANOVA, this value corresponds to scale for fixed effects.

tr

Trim level for the mean when carrying out robust tests. In case of an error, try reducing the value of tr, which is by default set to 0.2. Lowering the value might help.

nboot

Number of bootstrap samples for computing confidence interval for the effect size (Default: 100L).

A single grouping variable.

A list of additional arguments passed to patchwork::wrap_plots(), except for guides argument which is already separately specified here.

A list of additional arguments passed to patchwork::plot_annotation().

A data frame from which variables specified are to be taken.

Arguments passed on to ggcorrmat

cor.vars

List of variables for which the correlation matrix is to be computed and visualized. If NULL (default), all numeric variables from data will be used.

cor.vars.names

Optional list of names to be used for cor.vars. The names should be entered in the same order.

partial

Can be TRUE for partial correlations. For Bayesian partial correlations, "full" instead of pseudo-Bayesian partial correlations (i.e., Bayesian correlation based on frequentist partialization) are returned.

matrix.type

Character, "upper" (default), "lower", or "full", display full matrix, lower triangular or upper triangular matrix.

sig.level

Significance level (Default: 0.05). If the p-value in p-value matrix is bigger than sig.level, then the corresponding correlation coefficient is regarded as insignificant and flagged as such in the plot.

colors

A vector of 3 colors for low, mid, and high correlation values. If set to NULL, manual specification of colors will be turned off and 3 colors from the specified palette from package will be selected.

pch

Decides the point shape to be used for insignificant correlation coefficients (only valid when insig = "pch"). Default: pch = "cross".

ggcorrplot.args

A list of additional (mostly aesthetic) arguments that will be passed to ggcorrplot::ggcorrplot() function. The list should avoid any of the following arguments since they are already internally being used: corr, method, p.mat, sig.level, ggtheme, colors, lab, pch, legend.title, digits.

type

A character specifying the type of statistical approach:

• "parametric"

• "nonparametric"

• "robust"

• "bayes"

You can specify just the initial letter.

digits

Number of digits for rounding or significant figures. May also be "signif" to return significant figures or "scientific" to return scientific notation. Control the number of digits by adding the value as suffix, e.g. digits = "scientific4" to have scientific notation with 4 decimal places, or digits = "signif5" for 5 significant figures (see also signif()).

conf.level

Scalar between 0 and 1 (default: ⁠95%⁠ confidence/credible intervals, 0.95). If NULL, no confidence intervals will be computed.

tr

Trim level for the mean when carrying out robust tests. In case of an error, try reducing the value of tr, which is by default set to 0.2. Lowering the value might help.

bf.prior

A number between 0.5 and 2 (default 0.707), the prior width to use in calculating Bayes factors and posterior estimates. In addition to numeric arguments, several named values are also recognized: "medium", "wide", and "ultrawide", corresponding to r scale values of 1/2, sqrt(2)/2, and 1, respectively. In case of an ANOVA, this value corresponds to scale for fixed effects.

p.adjust.method

Adjustment method for p-values for multiple comparisons. Possible methods are: "holm" (default), "hochberg", "hommel", "bonferroni", "BH", "BY", "fdr", "none".

subtitle

The text for the plot subtitle. Will work only if results.subtitle = FALSE.

caption

The text for the plot caption. This argument is relevant only if bf.message = FALSE.

ggplot.component

A ggplot component to be added to the plot prepared by {ggstatsplot}. This argument is primarily helpful for grouped_ variants of all primary functions. Default is NULL. The argument should be entered as a {ggplot2} function or a list of {ggplot2} functions.

package,palette

Name of the package from which the given palette is to be extracted. The available palettes and packages can be checked by running View(paletteer::palettes_d_names).

ggtheme

A {ggplot2} theme. Default value is ggstatsplot::theme_ggstatsplot(). Any of the {ggplot2} themes (e.g., theme_bw()), or themes from extension packages are allowed (e.g., ggthemes::theme_fivethirtyeight(), hrbrthemes::theme_ipsum_ps(), etc.). But note that sometimes these themes will remove some of the details that {ggstatsplot} plots typically contains. For example, if relevant, ggbetweenstats() shows details about multiple comparison test as a label on the secondary Y-axis. Some themes (e.g. ggthemes::theme_fivethirtyeight()) will remove the secondary Y-axis and thus the details as well.

A single grouping variable.

A list of additional arguments passed to patchwork::wrap_plots(), except for guides argument which is already separately specified here.

A list of additional arguments passed to patchwork::plot_annotation().

A data frame (or a tibble) from which variables specified are to be taken. Other data types (e.g., matrix,table, array, etc.) will not be accepted. Additionally, grouped data frames from {dplyr} should be ungrouped before they are entered as data.

Arguments passed on to ggdotplotstats

y

Label or grouping variable.

point.args

A list of additional aesthetic arguments passed to geom_point.

centrality.line.args

A list of additional aesthetic arguments to be passed to the geom_line used to display the lines corresponding to the centrality parameter.

x

A numeric variable from the data frame data.

type

A character specifying the type of statistical approach:

• "parametric"

• "nonparametric"

• "robust"

• "bayes"

You can specify just the initial letter.

test.value

A number indicating the true value of the mean (Default: 0).

digits

Number of digits for rounding or significant figures. May also be "signif" to return significant figures or "scientific" to return scientific notation. Control the number of digits by adding the value as suffix, e.g. digits = "scientific4" to have scientific notation with 4 decimal places, or digits = "signif5" for 5 significant figures (see also signif()).

conf.level

Scalar between 0 and 1 (default: ⁠95%⁠ confidence/credible intervals, 0.95). If NULL, no confidence intervals will be computed.

tr

Trim level for the mean when carrying out robust tests. In case of an error, try reducing the value of tr, which is by default set to 0.2. Lowering the value might help.

bf.prior

A number between 0.5 and 2 (default 0.707), the prior width to use in calculating Bayes factors and posterior estimates. In addition to numeric arguments, several named values are also recognized: "medium", "wide", and "ultrawide", corresponding to r scale values of 1/2, sqrt(2)/2, and 1, respectively. In case of an ANOVA, this value corresponds to scale for fixed effects.

effsize.type

Type of effect size needed for parametric tests. The argument can be "d" (for Cohen's d) or "g" (for Hedge's g).

xlab

Label for x axis variable. If NULL (default), variable name for x will be used.

bf.message

Logical that decides whether to display Bayes Factor in favor of the null hypothesis. This argument is relevant only for parametric test (Default: TRUE).

results.subtitle

Decides whether the results of statistical tests are to be displayed as a subtitle (Default: TRUE). If set to FALSE, only the plot will be returned.

subtitle

The text for the plot subtitle. Will work only if results.subtitle = FALSE.

caption

The text for the plot caption. This argument is relevant only if bf.message = FALSE.

centrality.plotting

Logical that decides whether centrality tendency measure is to be displayed as a point with a label (Default: TRUE). Function decides which central tendency measure to show depending on the type argument.

• mean for parametric statistics

• median for non-parametric statistics

• trimmed mean for robust statistics

• MAP estimator for Bayesian statistics

If you want default centrality parameter, you can specify this using centrality.type argument.

centrality.type

Decides which centrality parameter is to be displayed. The default is to choose the same as type argument. You can specify this to be:

• "parameteric" (for mean)

• "nonparametric" (for median)

• robust (for trimmed mean)

• bayes (for MAP estimator)

Just as type argument, abbreviations are also accepted.

ggplot.component

A ggplot component to be added to the plot prepared by {ggstatsplot}. This argument is primarily helpful for grouped_ variants of all primary functions. Default is NULL. The argument should be entered as a {ggplot2} function or a list of {ggplot2} functions.

ggtheme

A {ggplot2} theme. Default value is ggstatsplot::theme_ggstatsplot(). Any of the {ggplot2} themes (e.g., theme_bw()), or themes from extension packages are allowed (e.g., ggthemes::theme_fivethirtyeight(), hrbrthemes::theme_ipsum_ps(), etc.). But note that sometimes these themes will remove some of the details that {ggstatsplot} plots typically contains. For example, if relevant, ggbetweenstats() shows details about multiple comparison test as a label on the secondary Y-axis. Some themes (e.g. ggthemes::theme_fivethirtyeight()) will remove the secondary Y-axis and thus the details as well.

ylab

Labels for y axis variable. If NULL (default), variable name for y will be used.

A single grouping variable.

A list of additional arguments passed to patchwork::wrap_plots(), except for guides argument which is already separately specified here.

A list of additional arguments passed to patchwork::plot_annotation().

A data frame (or a tibble) from which variables specified are to be taken. Other data types (e.g., matrix,table, array, etc.) will not be accepted. Additionally, grouped data frames from {dplyr} should be ungrouped before they are entered as data.

A numeric variable from the data frame data.

A single grouping variable.

The width of the histogram bins. Can be specified as a numeric value, or a function that calculates width from x. The default is to use the max(x) - min(x) / sqrt(N). You should always check this value and explore multiple widths to find the best to illustrate the stories in your data.

A list of additional arguments passed to patchwork::wrap_plots(), except for guides argument which is already separately specified here.

A list of additional arguments passed to patchwork::plot_annotation().

Arguments passed on to gghistostats

bin.args

A list of additional aesthetic arguments to be passed to the stat_bin used to display the bins. Do not specify binwidth argument in this list since it has already been specified using the dedicated argument.

centrality.line.args

A list of additional aesthetic arguments to be passed to the geom_line used to display the lines corresponding to the centrality parameter.

type

A character specifying the type of statistical approach:

• "parametric"

• "nonparametric"

• "robust"

• "bayes"

You can specify just the initial letter.

test.value

A number indicating the true value of the mean (Default: 0).

digits

Number of digits for rounding or significant figures. May also be "signif" to return significant figures or "scientific" to return scientific notation. Control the number of digits by adding the value as suffix, e.g. digits = "scientific4" to have scientific notation with 4 decimal places, or digits = "signif5" for 5 significant figures (see also signif()).

conf.level

Scalar between 0 and 1 (default: ⁠95%⁠ confidence/credible intervals, 0.95). If NULL, no confidence intervals will be computed.

tr

Trim level for the mean when carrying out robust tests. In case of an error, try reducing the value of tr, which is by default set to 0.2. Lowering the value might help.

bf.prior

A number between 0.5 and 2 (default 0.707), the prior width to use in calculating Bayes factors and posterior estimates. In addition to numeric arguments, several named values are also recognized: "medium", "wide", and "ultrawide", corresponding to r scale values of 1/2, sqrt(2)/2, and 1, respectively. In case of an ANOVA, this value corresponds to scale for fixed effects.

effsize.type

Type of effect size needed for parametric tests. The argument can be "d" (for Cohen's d) or "g" (for Hedge's g).

xlab

Label for x axis variable. If NULL (default), variable name for x will be used.

bf.message

Logical that decides whether to display Bayes Factor in favor of the null hypothesis. This argument is relevant only for parametric test (Default: TRUE).

results.subtitle

Decides whether the results of statistical tests are to be displayed as a subtitle (Default: TRUE). If set to FALSE, only the plot will be returned.

subtitle

The text for the plot subtitle. Will work only if results.subtitle = FALSE.

caption

The text for the plot caption. This argument is relevant only if bf.message = FALSE.

centrality.plotting

Logical that decides whether centrality tendency measure is to be displayed as a point with a label (Default: TRUE). Function decides which central tendency measure to show depending on the type argument.

• mean for parametric statistics

• median for non-parametric statistics

• trimmed mean for robust statistics

• MAP estimator for Bayesian statistics

If you want default centrality parameter, you can specify this using centrality.type argument.

centrality.type

Decides which centrality parameter is to be displayed. The default is to choose the same as type argument. You can specify this to be:

• "parameteric" (for mean)

• "nonparametric" (for median)

• robust (for trimmed mean)

• bayes (for MAP estimator)

Just as type argument, abbreviations are also accepted.

ggplot.component

A ggplot component to be added to the plot prepared by {ggstatsplot}. This argument is primarily helpful for grouped_ variants of all primary functions. Default is NULL. The argument should be entered as a {ggplot2} function or a list of {ggplot2} functions.

ggtheme

A {ggplot2} theme. Default value is ggstatsplot::theme_ggstatsplot(). Any of the {ggplot2} themes (e.g., theme_bw()), or themes from extension packages are allowed (e.g., ggthemes::theme_fivethirtyeight(), hrbrthemes::theme_ipsum_ps(), etc.). But note that sometimes these themes will remove some of the details that {ggstatsplot} plots typically contains. For example, if relevant, ggbetweenstats() shows details about multiple comparison test as a label on the secondary Y-axis. Some themes (e.g. ggthemes::theme_fivethirtyeight()) will remove the secondary Y-axis and thus the details as well.

A data frame (or a tibble) from which variables specified are to be taken. Other data types (e.g., matrix,table, array, etc.) will not be accepted. Additionally, grouped data frames from {dplyr} should be ungrouped before they are entered as data.

Arguments passed on to ggpiestats

x

The variable to use as the rows in the contingency table. Please note that if there are empty factor levels in your variable, they will be dropped.

y

The variable to use as the columns in the contingency table. Please note that if there are empty factor levels in your variable, they will be dropped. Default is NULL. If NULL, one-sample proportion test (a goodness of fit test) will be run for the x variable. Otherwise an appropriate association test will be run. This argument can not be NULL for ggbarstats function.

proportion.test

Decides whether proportion test for x variable is to be carried out for each level of y. Defaults to results.subtitle. In ggbarstats, only p-values from this test will be displayed.

digits.perc

Numeric that decides number of decimal places for percentage labels (Default: 0L).

label

Character decides what information needs to be displayed on the label in each pie slice. Possible options are "percentage" (default), "counts", "both".

label.args

Additional aesthetic arguments that will be passed to ggplot2::geom_label().

label.repel

Whether labels should be repelled using {ggrepel} package. This can be helpful in case the labels are overlapping.

legend.title

Title text for the legend.

bf.message

Logical that decides whether to display Bayes Factor in favor of the null hypothesis. This argument is relevant only for parametric test (Default: TRUE).

results.subtitle

Decides whether the results of statistical tests are to be displayed as a subtitle (Default: TRUE). If set to FALSE, only the plot will be returned.

subtitle

The text for the plot subtitle. Will work only if results.subtitle = FALSE.

caption

The text for the plot caption. This argument is relevant only if bf.message = FALSE.

ggplot.component

A ggplot component to be added to the plot prepared by {ggstatsplot}. This argument is primarily helpful for grouped_ variants of all primary functions. Default is NULL. The argument should be entered as a {ggplot2} function or a list of {ggplot2} functions.

package,palette

Name of the package from which the given palette is to be extracted. The available palettes and packages can be checked by running View(paletteer::palettes_d_names).

ggtheme

A {ggplot2} theme. Default value is ggstatsplot::theme_ggstatsplot(). Any of the {ggplot2} themes (e.g., theme_bw()), or themes from extension packages are allowed (e.g., ggthemes::theme_fivethirtyeight(), hrbrthemes::theme_ipsum_ps(), etc.). But note that sometimes these themes will remove some of the details that {ggstatsplot} plots typically contains. For example, if relevant, ggbetweenstats() shows details about multiple comparison test as a label on the secondary Y-axis. Some themes (e.g. ggthemes::theme_fivethirtyeight()) will remove the secondary Y-axis and thus the details as well.

type

A character specifying the type of statistical approach:

• "parametric"

• "nonparametric"

• "robust"

• "bayes"

You can specify just the initial letter.

digits

Number of digits for rounding or significant figures. May also be "signif" to return significant figures or "scientific" to return scientific notation. Control the number of digits by adding the value as suffix, e.g. digits = "scientific4" to have scientific notation with 4 decimal places, or digits = "signif5" for 5 significant figures (see also signif()).

conf.level

Scalar between 0 and 1 (default: ⁠95%⁠ confidence/credible intervals, 0.95). If NULL, no confidence intervals will be computed.

paired

Logical indicating whether data came from a within-subjects or repeated measures design study (Default: FALSE).

counts

The variable in data containing counts, or NULL if each row represents a single observation.

ratio

A vector of proportions: the expected proportions for the proportion test (should sum to 1). Default is NULL, which means the null is equal theoretical proportions across the levels of the nominal variable. E.g., ratio = c(0.5, 0.5) for two levels, ratio = c(0.25, 0.25, 0.25, 0.25) for four levels, etc.

sampling.plan

Character describing the sampling plan. Possible options are "indepMulti" (independent multinomial; default), "poisson", "jointMulti" (joint multinomial), "hypergeom" (hypergeometric). For more, see ?BayesFactor::contingencyTableBF().

fixed.margin

For the independent multinomial sampling plan, which margin is fixed ("rows" or "cols"). Defaults to "rows".

prior.concentration

Specifies the prior concentration parameter, set to 1 by default. It indexes the expected deviation from the null hypothesis under the alternative, and corresponds to Gunel and Dickey's (1974) "a" parameter.

A single grouping variable.

A list of additional arguments passed to patchwork::wrap_plots(), except for guides argument which is already separately specified here.

A list of additional arguments passed to patchwork::plot_annotation().

A data frame (or a tibble) from which variables specified are to be taken. Other data types (e.g., matrix,table, array, etc.) will not be accepted. Additionally, grouped data frames from {dplyr} should be ungrouped before they are entered as data.

Arguments passed on to ggscatterstats

label.var

Variable to use for points labels entered as a symbol (e.g. var1).

label.expression

An expression evaluating to a logical vector that determines the subset of data points to label (e.g. y < 4 & z < 20). While using this argument with purrr::pmap(), you will have to provide a quoted expression (e.g. quote(y < 4 & z < 20)).

point.label.args

A list of additional aesthetic arguments to be passed to ggrepel::geom_label_repel geom used to display the labels.

smooth.line.args

A list of additional aesthetic arguments to be passed to geom_smooth geom used to display the regression line.

point.args

A list of additional aesthetic arguments to be passed to geom_point geom used to display the raw data points.

marginal

Decides whether marginal distributions will be plotted on axes using ggside functions. The default is TRUE. The package ggside must already be installed by the user.

point.width.jitter,point.height.jitter

Degree of jitter in x and y direction, respectively. Defaults to 0 (0%) of the resolution of the data. Note that the jitter should not be specified in the point.args because this information will be passed to two different geoms: one displaying the points and the other displaying the *labels for these points.

xsidehistogram.args,ysidehistogram.args

A list of arguments passed to respective geom_s from the {ggside} package to change the marginal distribution histograms plots.

x

The column in data containing the explanatory variable to be plotted on the x-axis.

y

The column in data containing the response (outcome) variable to be plotted on the y-axis.

type

A character specifying the type of statistical approach:

• "parametric"

• "nonparametric"

• "robust"

• "bayes"

You can specify just the initial letter.

digits

Number of digits for rounding or significant figures. May also be "signif" to return significant figures or "scientific" to return scientific notation. Control the number of digits by adding the value as suffix, e.g. digits = "scientific4" to have scientific notation with 4 decimal places, or digits = "signif5" for 5 significant figures (see also signif()).

conf.level

Scalar between 0 and 1 (default: ⁠95%⁠ confidence/credible intervals, 0.95). If NULL, no confidence intervals will be computed.

tr

Trim level for the mean when carrying out robust tests. In case of an error, try reducing the value of tr, which is by default set to 0.2. Lowering the value might help.

bf.prior

A number between 0.5 and 2 (default 0.707), the prior width to use in calculating Bayes factors and posterior estimates. In addition to numeric arguments, several named values are also recognized: "medium", "wide", and "ultrawide", corresponding to r scale values of 1/2, sqrt(2)/2, and 1, respectively. In case of an ANOVA, this value corresponds to scale for fixed effects.

xlab

Label for x axis variable. If NULL (default), variable name for x will be used.

ylab

Labels for y axis variable. If NULL (default), variable name for y will be used.

bf.message

Logical that decides whether to display Bayes Factor in favor of the null hypothesis. This argument is relevant only for parametric test (Default: TRUE).

results.subtitle

Decides whether the results of statistical tests are to be displayed as a subtitle (Default: TRUE). If set to FALSE, only the plot will be returned.

subtitle

The text for the plot subtitle. Will work only if results.subtitle = FALSE.

caption

The text for the plot caption. This argument is relevant only if bf.message = FALSE.

ggplot.component

A ggplot component to be added to the plot prepared by {ggstatsplot}. This argument is primarily helpful for grouped_ variants of all primary functions. Default is NULL. The argument should be entered as a {ggplot2} function or a list of {ggplot2} functions.

ggtheme

A {ggplot2} theme. Default value is ggstatsplot::theme_ggstatsplot(). Any of the {ggplot2} themes (e.g., theme_bw()), or themes from extension packages are allowed (e.g., ggthemes::theme_fivethirtyeight(), hrbrthemes::theme_ipsum_ps(), etc.). But note that sometimes these themes will remove some of the details that {ggstatsplot} plots typically contains. For example, if relevant, ggbetweenstats() shows details about multiple comparison test as a label on the secondary Y-axis. Some themes (e.g. ggthemes::theme_fivethirtyeight()) will remove the secondary Y-axis and thus the details as well.